Index

_

__add__() (darshan.report.DarshanReport method) __deepcopy__() (darshan.report.DarshanReport method) __del__() (darshan.report.DarshanReport method) __enter__() (darshan.report.DarshanReport method) __exit__() (darshan.report.DarshanReport method) __init__() (darshan.report.DarshanReport method)

_cleanup() (darshan.report.DarshanReport method) _df_to_rec() (in module darshan.backend.cffi_backend) _locate_log() (in module darshan.log_utils) _log_get_heatmap_record() (in module darshan.backend.cffi_backend) _log_get_lustre_record() (in module darshan.backend.cffi_backend) _make_generic_record() (in module darshan.backend.cffi_backend)

A

accumulate_records() (in module darshan.backend.cffi_backend) add_filesystem_cols() (in module darshan.experimental.plots.data_access_by_filesystem) add_record() (darshan.datatypes.heatmap.Heatmap method) adjust_for_colorbar() (in module darshan.experimental.plots.plot_dxt_heatmap)

agg_ioops() (in module darshan.experimental.aggregators.agg_ioops) append() (darshan.report.DarshanRecordCollection method) autolabel() (in module darshan.experimental.plots.plot_access_histogram) (in module darshan.experimental.plots.plot_opcounts) (in module darshan.experimental.plots.plot_posix_access_pattern)

B

build_sections() (darshan.cli.summary.ReportData method)

C

check_empty_series() (in module darshan.experimental.plots.data_access_by_filesystem) check_version() (in module darshan.discover_darshan) collapse_access_cols() (in module darshan.experimental.plots.plot_common_access_table) combine_access_sizes() (in module darshan.experimental.plots.plot_common_access_table) combine_dfs() (in module darshan.cli.file_stats) (in module darshan.cli.job_stats) combine_hdf5_modules() (in module darshan.experimental.plots.plot_io_cost) combine_pnetcdf_modules() (in module darshan.experimental.plots.plot_io_cost) compress_pathname() (in module darshan.experimental.aggregators.create_timeline) configure_groups() (in module darshan.experimental.aggregators.create_timeline)

convert_file_id_to_path() (in module darshan.experimental.plots.data_access_by_filesystem) convert_file_path_to_root_path() (in module darshan.experimental.plots.data_access_by_filesystem) convert_id_dict_to_arrays() (in module darshan.experimental.plots.data_access_by_filesystem) counter_names() (in module darshan.backend.cffi_backend) counters (darshan.report.DarshanReport property) create_dxttimeline() (in module darshan.experimental.aggregators.create_dxttimeline) create_sankey() (in module darshan.experimental.aggregators.create_sankey) create_time_summary() (in module darshan.experimental.aggregators.create_time_summary) create_timeline() (in module darshan.experimental.aggregators.create_timeline) CustomHelpFormatter (class in darshan.cli)

D

darshan module darshan.backend module darshan.backend.api_def_c module darshan.backend.cffi_backend module darshan.cli module darshan.cli.file_stats module darshan.cli.info module darshan.cli.job_stats module darshan.cli.name_records module darshan.cli.summary module darshan.cli.to_json module darshan.datatypes module darshan.datatypes.heatmap module darshan.discover_darshan module darshan.examples module darshan.examples.example_logs module darshan.experimental module darshan.experimental.aggregators module darshan.experimental.aggregators.agg_ioops module darshan.experimental.aggregators.create_dxttimeline module darshan.experimental.aggregators.create_sankey module darshan.experimental.aggregators.create_time_summary module darshan.experimental.aggregators.create_timeline module darshan.experimental.aggregators.mod_agg_iohist module darshan.experimental.aggregators.name_records_summary module darshan.experimental.aggregators.print_module_records module darshan.experimental.aggregators.records_as_dict module darshan.experimental.aggregators.summarize module darshan.experimental.plots module darshan.experimental.plots.data_access_by_filesystem module darshan.experimental.plots.heatmap_handling module darshan.experimental.plots.plot_access_histogram module darshan.experimental.plots.plot_common_access_table module

darshan.experimental.plots.plot_dxt_heatmap module darshan.experimental.plots.plot_dxt_heatmap2 module darshan.experimental.plots.plot_io_cost module darshan.experimental.plots.plot_opcounts module darshan.experimental.plots.plot_posix_access_pattern module darshan.log_utils module darshan.report module darshan.tests module darshan.tests.conftest module darshan.tests.input module darshan.tests.test_cffi_misc module darshan.tests.test_data_access_by_filesystem module darshan.tests.test_error module darshan.tests.test_heatmap_handling module darshan.tests.test_lib_accum module darshan.tests.test_log_utils module darshan.tests.test_moddxt module darshan.tests.test_modmpiio module darshan.tests.test_modposix module darshan.tests.test_modstdio module darshan.tests.test_plot_common_access_table module darshan.tests.test_plot_dxt_heatmap module darshan.tests.test_plot_exp_common module darshan.tests.test_plot_io_cost module darshan.tests.test_report_copy module DarshanRecordCollection (class in darshan.report) DarshanReport (class in darshan.report) DarshanReportJSONEncoder (class in darshan.report) DarshanReportTable (class in darshan.experimental.plots.plot_common_access_table) DarshanVersionError default() (darshan.report.DarshanReportJSONEncoder method) determine_hmap_runtime() (in module darshan.experimental.plots.plot_dxt_heatmap) dict_list() (in module darshan.tests.test_heatmap_handling) dict_list_no_writes() (in module darshan.tests.test_heatmap_handling) discover_darshan_pkgconfig() (in module darshan.discover_darshan) discover_darshan_pyinstaller() (in module darshan.discover_darshan) discover_darshan_shutil() (in module darshan.discover_darshan) discover_darshan_wheel() (in module darshan.discover_darshan) discover_subcommands() (in module darshan.cli)

E

empty_series_handler() (in module darshan.experimental.plots.data_access_by_filesystem)

enable_experimental() (in module darshan)

F

fcounter_names() (in module darshan.backend.cffi_backend) find_utils() (in module darshan.discover_darshan)

first_n_recs() (in module darshan.cli.file_stats) (in module darshan.cli.job_stats)

G

gather_count_data() (in module darshan.experimental.plots.plot_opcounts) generate_fig() (darshan.cli.summary.ReportFigure method) get_access_count_df() (in module darshan.experimental.plots.plot_common_access_table) get_aggregate_data() (in module darshan.experimental.plots.heatmap_handling) get_by_avg_series() (in module darshan.experimental.plots.plot_io_cost) get_encoded_fig() (darshan.cli.summary.ReportFigure static method) get_footer() (darshan.cli.summary.ReportData method) get_full_command() (darshan.cli.summary.ReportData static method) get_header() (darshan.cli.summary.ReportData method) get_heatmap_df() (in module darshan.experimental.plots.heatmap_handling) get_input_logs() (in module darshan.cli.file_stats) (in module darshan.cli.job_stats) get_io_cost_df() (in module darshan.experimental.plots.plot_io_cost) get_lib_version() (in module darshan.backend.cffi_backend)

get_log_path() (in module darshan.log_utils) get_metadata_table() (darshan.cli.summary.ReportData method) get_module_table() (darshan.cli.summary.ReportData method) get_most_common_access_sizes() (in module darshan.experimental.plots.plot_common_access_table) get_rd_wr_dfs() (in module darshan.experimental.plots.heatmap_handling) get_runtime() (darshan.cli.summary.ReportData static method) get_single_df_dict() (in module darshan.experimental.plots.heatmap_handling) get_stylesheet() (darshan.cli.summary.ReportData method) get_x_axis_tick_labels() (in module darshan.experimental.plots.plot_dxt_heatmap) get_x_axis_ticks() (in module darshan.experimental.plots.plot_dxt_heatmap) get_y_axis_tick_labels() (in module darshan.experimental.plots.plot_dxt_heatmap) get_y_axis_ticks() (in module darshan.experimental.plots.plot_dxt_heatmap) get_yticklabels() (in module darshan.experimental.plots.plot_dxt_heatmap) group_by_file() (in module darshan.cli.file_stats)

H

Heatmap (class in darshan.datatypes.heatmap)

heatmaps (darshan.report.DarshanReport property) hostname (darshan.experimental.plots.heatmap_handling.SegDict attribute)

I

id (darshan.experimental.plots.heatmap_handling.SegDict attribute) identify_filesystems() (in module darshan.experimental.plots.data_access_by_filesystem) info() (darshan.datatypes.heatmap.Heatmap method) (darshan.report.DarshanRecordCollection method) (darshan.report.DarshanReport method)

init() (in module darshan.tests.test_modposix) insert() (darshan.report.DarshanRecordCollection method) installed_path() (in module darshan.examples.example_logs) (in module darshan.tests.input)

J

jointgrid() (in module darshan.tests.test_plot_dxt_heatmap)

L

load_darshan_header() (in module darshan.backend.api_def_c) (in module darshan.discover_darshan) log_close() (in module darshan.backend.cffi_backend) log_get_dxt_record() (in module darshan.backend.cffi_backend) log_get_exe() (in module darshan.backend.cffi_backend) log_get_generic_record() (in module darshan.backend.cffi_backend)

log_get_job() (in module darshan.backend.cffi_backend) log_get_modules() (in module darshan.backend.cffi_backend) log_get_mounts() (in module darshan.backend.cffi_backend) log_get_name_records() (in module darshan.backend.cffi_backend) log_get_record() (in module darshan.backend.cffi_backend) log_lookup_name_records() (in module darshan.backend.cffi_backend) log_open() (in module darshan.backend.cffi_backend)

M

main() (in module darshan.cli) (in module darshan.cli.file_stats) (in module darshan.cli.info) (in module darshan.cli.job_stats) (in module darshan.cli.name_records) (in module darshan.cli.summary) (in module darshan.cli.to_json) metadata (darshan.report.DarshanReport property) mod_agg_iohist() (in module darshan.experimental.aggregators.mod_agg_iohist) mod_name_to_idx() (in module darshan.backend.cffi_backend) mod_read_all_apmpi_records() (darshan.report.DarshanReport method) mod_read_all_apxc_records() (darshan.report.DarshanReport method) mod_read_all_dxt_records() (darshan.report.DarshanReport method) mod_read_all_lustre_records() (darshan.report.DarshanReport method) mod_read_all_records() (darshan.report.DarshanReport method) mod_records() (darshan.report.DarshanReport method) module darshan darshan.backend darshan.backend.api_def_c darshan.backend.cffi_backend darshan.cli darshan.cli.file_stats darshan.cli.info darshan.cli.job_stats darshan.cli.name_records darshan.cli.summary darshan.cli.to_json darshan.datatypes darshan.datatypes.heatmap darshan.discover_darshan darshan.examples darshan.examples.example_logs darshan.experimental darshan.experimental.aggregators darshan.experimental.aggregators.agg_ioops darshan.experimental.aggregators.create_dxttimeline darshan.experimental.aggregators.create_sankey darshan.experimental.aggregators.create_time_summary darshan.experimental.aggregators.create_timeline darshan.experimental.aggregators.mod_agg_iohist darshan.experimental.aggregators.name_records_summary darshan.experimental.aggregators.print_module_records darshan.experimental.aggregators.records_as_dict darshan.experimental.aggregators.summarize darshan.experimental.plots darshan.experimental.plots.data_access_by_filesystem darshan.experimental.plots.heatmap_handling darshan.experimental.plots.plot_access_histogram darshan.experimental.plots.plot_common_access_table darshan.experimental.plots.plot_dxt_heatmap darshan.experimental.plots.plot_dxt_heatmap2 darshan.experimental.plots.plot_io_cost darshan.experimental.plots.plot_opcounts darshan.experimental.plots.plot_posix_access_pattern darshan.log_utils darshan.report darshan.tests darshan.tests.conftest darshan.tests.input darshan.tests.test_cffi_misc darshan.tests.test_data_access_by_filesystem darshan.tests.test_error darshan.tests.test_heatmap_handling darshan.tests.test_lib_accum darshan.tests.test_log_utils darshan.tests.test_moddxt darshan.tests.test_modmpiio darshan.tests.test_modposix darshan.tests.test_modstdio darshan.tests.test_plot_common_access_table darshan.tests.test_plot_dxt_heatmap darshan.tests.test_plot_exp_common darshan.tests.test_plot_io_cost darshan.tests.test_report_copy

ModuleNotInDarshanLog modules (darshan.report.DarshanReport property)

N

name_records_summary() (in module darshan.experimental.aggregators.name_records_summary)

normalize_mod() (in module darshan.experimental.aggregators.create_timeline)

O

open() (darshan.report.DarshanReport method)

P

plot_access_histogram() (in module darshan.experimental.plots.plot_access_histogram) plot_common_access_table() (in module darshan.experimental.plots.plot_common_access_table) plot_data() (in module darshan.experimental.plots.data_access_by_filesystem) plot_dxt_heatmap2() (in module darshan.experimental.plots.plot_dxt_heatmap2) plot_heatmap() (in module darshan.experimental.plots.plot_dxt_heatmap) plot_io_cost() (in module darshan.experimental.plots.plot_io_cost) plot_opcounts() (in module darshan.experimental.plots.plot_opcounts) plot_posix_access_pattern() (in module darshan.experimental.plots.plot_posix_access_pattern)

plot_with_report() (in module darshan.experimental.plots.data_access_by_filesystem) print_module_records() (in module darshan.experimental.aggregators.print_module_records) process_byte_counts() (in module darshan.experimental.plots.data_access_by_filesystem) process_logfile() (in module darshan.cli.file_stats) (in module darshan.cli.job_stats) process_unique_files() (in module darshan.experimental.plots.data_access_by_filesystem) purge_empty_nestedGroups() (in module darshan.experimental.aggregators.create_timeline) pytest_configure() (in module darshan.tests.conftest)

R

rank (darshan.experimental.plots.heatmap_handling.SegDict attribute) read_all() (darshan.report.DarshanReport method) read_all_dxt_records() (darshan.report.DarshanReport method) read_all_generic_records() (darshan.report.DarshanReport method) read_all_heatmap_records() (darshan.report.DarshanReport method) read_count (darshan.experimental.plots.heatmap_handling.SegDict attribute) read_metadata() (darshan.report.DarshanReport method) read_name_records() (darshan.report.DarshanReport method) read_segments (darshan.experimental.plots.heatmap_handling.SegDict attribute) rebase_timestamps() (darshan.report.DarshanReport method) rec_to_rw_counter_dfs() (in module darshan.experimental.plots.data_access_by_filesystem)

rec_to_rw_counter_dfs_with_cols() (in module darshan.experimental.plots.data_access_by_filesystem) records_as_dict() (in module darshan.experimental.aggregators.records_as_dict) register_figures() (darshan.cli.summary.ReportData method) remove_marginal_graph_ticks_and_labels() (in module darshan.experimental.plots.plot_dxt_heatmap) remove_nonzero_rows() (in module darshan.experimental.plots.plot_common_access_table) ReportData (class in darshan.cli.summary) ReportFigure (class in darshan.cli.summary) response() (in module darshan.tests.test_modmpiio) (in module darshan.tests.test_modstdio) rich_print() (in module darshan.cli.file_stats) (in module darshan.cli.job_stats)

S

SegDict (class in darshan.experimental.plots.heatmap_handling) set_x_axis_ticks_and_labels() (in module darshan.experimental.plots.plot_dxt_heatmap) set_y_axis_ticks_and_labels() (in module darshan.experimental.plots.plot_dxt_heatmap) setup_parser() (in module darshan.cli.file_stats) (in module darshan.cli.info) (in module darshan.cli.job_stats) (in module darshan.cli.name_records) (in module darshan.cli.summary) (in module darshan.cli.to_json)

sort_dfs_desc() (in module darshan.cli.file_stats) (in module darshan.cli.job_stats) summarize() (in module darshan.experimental.aggregators.summarize) summarized_items() (in module darshan.experimental.aggregators.create_timeline)

T

test_adjust_for_colorbar() (in module darshan.tests.test_plot_dxt_heatmap) test_annotate_center_align() (in module darshan.tests.test_data_access_by_filesystem) test_bar_heights() (in module darshan.tests.test_plot_exp_common) test_cannotopen() (in module darshan.tests.test_error) test_cat_labels_std_streams() (in module darshan.tests.test_data_access_by_filesystem) test_check_empty_series() (in module darshan.tests.test_data_access_by_filesystem) test_collapse_access_cols() (in module darshan.tests.test_plot_common_access_table) test_combine_hdf5_modules() (in module darshan.tests.test_plot_io_cost) test_common_access_table() (in module darshan.tests.test_plot_common_access_table) test_convert_file_id_to_path() (in module darshan.tests.test_data_access_by_filesystem) test_convert_file_path_to_root_path() (in module darshan.tests.test_data_access_by_filesystem) test_counters() (in module darshan.tests.test_modmpiio) (in module darshan.tests.test_modposix) (in module darshan.tests.test_modstdio) test_df_to_rec() (in module darshan.tests.test_cffi_misc) test_dxt_records() (in module darshan.tests.test_moddxt) test_empty_data_posix_text_position() (in module darshan.tests.test_data_access_by_filesystem) test_empty_data_posix_y_axis_annot_position() (in module darshan.tests.test_data_access_by_filesystem) test_empty_series_handler() (in module darshan.tests.test_data_access_by_filesystem) test_failure_bad_logname() (in module darshan.tests.test_log_utils) test_fcounters() (in module darshan.tests.test_modmpiio) (in module darshan.tests.test_modposix) (in module darshan.tests.test_modstdio) test_file_count_summary_table() (in module darshan.tests.test_lib_accum) test_file_hash_type() (in module darshan.tests.test_cffi_misc) test_get_access_count_df() (in module darshan.tests.test_plot_common_access_table) test_get_aggregate_data() (in module darshan.tests.test_heatmap_handling) test_get_by_avg_series() (in module darshan.tests.test_plot_io_cost) test_get_heatmap_df() (in module darshan.tests.test_heatmap_handling) test_get_io_cost_df() (in module darshan.tests.test_plot_io_cost) test_get_lib_version() (in module darshan.tests.test_cffi_misc) test_get_rd_wr_dfs() (in module darshan.tests.test_heatmap_handling) test_get_rd_wr_dfs_no_write() (in module darshan.tests.test_heatmap_handling) test_get_single_df_dict() (in module darshan.tests.test_heatmap_handling) test_get_y_axis_tick_labels() (in module darshan.tests.test_plot_dxt_heatmap) test_get_y_axis_ticks() (in module darshan.tests.test_plot_dxt_heatmap) test_identify_filesystems() (in module darshan.tests.test_data_access_by_filesystem) test_ishouldrun() (in module darshan.tests.test_modmpiio) (in module darshan.tests.test_modposix) (in module darshan.tests.test_modstdio) test_issue_590() (in module darshan.tests.test_plot_io_cost) test_log_get_generic_record() (in module darshan.tests.test_cffi_misc)

test_log_scale_display() (in module darshan.tests.test_data_access_by_filesystem) test_misc_funcs() (in module darshan.tests.test_plot_common_access_table) test_module_overview_table() (in module darshan.tests.test_lib_accum) test_plot_data() (in module darshan.tests.test_data_access_by_filesystem) test_plot_data_labels() (in module darshan.tests.test_data_access_by_filesystem) test_plot_data_shared_x_axis() (in module darshan.tests.test_data_access_by_filesystem) test_plot_heatmap() (in module darshan.tests.test_plot_dxt_heatmap) test_plot_io_cost_empty_data() (in module darshan.tests.test_plot_io_cost) test_plot_io_cost_filtered_data() (in module darshan.tests.test_plot_io_cost) test_plot_io_cost_x_ticks_and_labels() (in module darshan.tests.test_plot_io_cost) test_plot_io_cost_y_ticks_and_labels() (in module darshan.tests.test_plot_io_cost) test_plot_io_cost_ylims() (in module darshan.tests.test_plot_io_cost) test_plot_with_empty_data() (in module darshan.tests.test_data_access_by_filesystem) test_plot_with_report_no_file() (in module darshan.tests.test_data_access_by_filesystem) test_plot_with_report_proper_sort() (in module darshan.tests.test_data_access_by_filesystem) test_plot_with_report_root_files() (in module darshan.tests.test_data_access_by_filesystem) test_process_byte_counts() (in module darshan.tests.test_data_access_by_filesystem) test_process_unique_files() (in module darshan.tests.test_data_access_by_filesystem) test_rec_to_rw_counter_dfs_with_cols() (in module darshan.tests.test_data_access_by_filesystem) test_remove_marginal_graph_ticks_and_labels() (in module darshan.tests.test_plot_dxt_heatmap) test_repeated_access() (in module darshan.tests.test_modmpiio) (in module darshan.tests.test_modposix) (in module darshan.tests.test_modstdio) test_retrieve_both_repos() (in module darshan.tests.test_log_utils) test_reverse_record_array() (in module darshan.tests.test_cffi_misc) test_set_x_axis_ticks_and_labels() (in module darshan.tests.test_plot_dxt_heatmap) test_set_y_axis_ticks_and_labels() (in module darshan.tests.test_plot_dxt_heatmap) test_stdio_basic_inclusion() (in module darshan.tests.test_data_access_by_filesystem) test_subplot_restriction() (in module darshan.tests.test_data_access_by_filesystem) test_text_center_align() (in module darshan.tests.test_data_access_by_filesystem) test_unique_fs_rw_counter() (in module darshan.tests.test_data_access_by_filesystem) test_vertical_resize() (in module darshan.tests.test_data_access_by_filesystem) test_with_filtered_data() (in module darshan.tests.test_data_access_by_filesystem) test_xticks_and_labels() (in module darshan.tests.test_plot_exp_common) to_df() (darshan.datatypes.heatmap.Heatmap method) (darshan.report.DarshanRecordCollection method) to_dict() (darshan.report.DarshanRecordCollection method) (darshan.report.DarshanReport method) to_json() (darshan.report.DarshanRecordCollection method) (darshan.report.DarshanReport method) to_list() (darshan.report.DarshanRecordCollection method) to_numpy() (darshan.report.DarshanRecordCollection method)

U

unique_fs_rw_counter() (in module darshan.experimental.plots.data_access_by_filesystem)

update_parent_item() (in module darshan.experimental.aggregators.create_timeline)

W

write_count (darshan.experimental.plots.heatmap_handling.SegDict attribute)

write_segments (darshan.experimental.plots.heatmap_handling.SegDict attribute)